
Clusters Description

- total: total number of clusters in CoDNaS-RNA
- gold: number of invariable clusters under alternative clustering methods
- RNA_RNA: number of clusters with RNA-RNA interactions
- RNA_Prot: number of clusters with RNA-Protein interactions
- RNA_DNA: number of clusters with RNA-DNA interactions
RNA Types

- hh_ribozyme: hammerhead ribozymes
- misc_RNA: miscellaneous RNAs according to INSCD
- other: RNAs of other types according to INSCD
Distribution of RMSD Values

- non-max pairs: distribution of RMSD values per pair excluding pairs with maximum RMSD
- max pairs: distribution of RMSD values in pairs with maximum RMSD
TM-score Description

- non-max pairs: distribution of TM-score values per pair excluding pairs with maximum RMSD
- max pairs: distribution of TM-score values in pairs with maximum RMSD
Interactions

- ligand:ligand: ligand:ligand contacts per residue
- nt:aa: nucleotide-amino acid contacts per residue
- nt:ligand: nucleotide-ligand contacts per residue

- ligand:ligand: ligand:ligand contacts per residue
- aa:ligand: aa:ligand contacts per residue
- nt:misc: other nucleotides contacts per residue

- aa:misc: other amino acid contacts per residue
- misc:misc: other types of contacts per residue
- ligand:misc: other ligand contacts per residue
Experimental Methods and Physicochemical Conditions

- X-Ray Diffraction: number of PDB chains solved by x-ray diffraction
- Solution NMR:number of PDB chains solved by solution nmr
- Electron Microscopy: number of PDB chains solved by cryo-electron microscopy

- Difference in temperature: binned difference in temperature values present per aligned pair

Conformers & chains information

- Num. conf. intervals: binned number of conformers per cluster

- Seq. length: binned sequence length per RNA chain
Main RNA Species Composition

- Others: includes 118 species represented in 550 RNA chains